BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025B08SP1|AL428335
(862 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig224 1600 0.0
3x_Contig419 460 e-129
>3x_Contig224
Length = 2261
Score = 1600 bits (807), Expect = 0.0
Identities = 854/866 (98%), Gaps = 4/866 (0%)
Strand = Plus / Plus
Query: 1 gatcagcgacaacatatactggaatcttgtgatgataatgttataaataagggtcctgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1267 gatcagcgacaacatatactggaatcttgtgatgataatgttataaataagggtcctgat 1326
Query: 61 tcattagatttttgtcgcttcctgttaagtattagtcgaaggttctttagtgtgcaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 tcattagatttttgtcgcttcctgttaagtattagtcgaaggttctttagtgtgcaaata 1386
Query: 121 gtacaccaagcaaacaccaaagtaaaattctaccatgagttaagagaagaagttagatta 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1387 gtacaccaagcaaacaccaaagtaaaattctaccatgagtcaagagaagaagttagatta 1446
Query: 181 ctccattgaccaggagactcaactggaatctggtgaattccacgaacaaaacagctatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1447 ctccattgaccaggagactcaactggaatctggtgaattccacgaacaaaacagctatgt 1506
Query: 241 ttcgcaatctgatgcttctccagtcgagggtaccaggtgggaacggttcagggactcgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1507 ttcgcaatctgatgcttctccagtcgagggtaccaggtgggaacggttcagggactcgtt 1566
Query: 301 caagcgagctgatactcaggatttggatcctaatttaacggacgccgagaaaatggccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1567 caagcgagctgatactcaggatttggatcctaatttaacggacgccgagaaaatggccat 1626
Query: 361 tcttacagctaatgcgcctttgaaaagaactttgaaatcaagacatttgcagatga--tt 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1627 tcttacagctaatgcgcctttgaaaagaactttgaaatcaagacatttgcagatgaatat 1686
Query: 419 gccatcggtggtgctattggtaccggtcttttcgttggttctggtaaggcattggctact 478
||||||||||||||||||| || | ||||||||||||||||||||||| ||||||||||
Sbjct: 1687 gccatcggtggtgctattgaaacagatcttttcgttggttctggtaaggaattggctact 1746
Query: 479 gccggtcctgcaggtatct-tgatcggttgggctcttaccggtactatgatttactgtat 537
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 1747 gccggtcctgcaggtatctatgataggttgggctcttaccggtactatgatttactgtat 1806
Query: 538 ggttatggccatgggt-gagttagctgtcactttccctatcgctggtgggttcaccactt 596
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1807 ggttatggccatgggtggagttagctgtcactttccctatcgctggtgggttcaccactt 1866
Query: 597 atgcatccagatttgtcgatgaatccttcggtttcgcttttaacactatttatatgttgc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1867 atgcatccagatttgtcgatgaatccttcggtttcgcttttaacactatttatatgttgc 1926
Query: 657 aatggttagttgtgcttcccttggaaattgttgctgcttctattacggtgaattactggg 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1927 aatggttagttgtgcttcccttggaaattgttgctgcttctattacggtgaattactggg 1986
Query: 717 gtactccagataaatatagagatgggtttgttgcgttgttttatgtggtgattgtcgcta 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1987 gtactccagataaatatagagatgggtttgttgcgttgttttatgtggtgattgtcgcta 2046
Query: 777 tcaatttctttggtgttaagggttacggtgaagctgaatttatcttttccttcatcaaag 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2047 tcaatttctttggtgttaagggttacggtgaagctgaatttatcttttccttcatcaaag 2106
Query: 837 ttatcactgtcattggatatatcatt 862
||||||||||||||||||||||||||
Sbjct: 2107 ttatcactgtcattggatatatcatt 2132
>3x_Contig419
Length = 1943
Score = 460 bits (232), Expect = e-129
Identities = 430/496 (86%)
Strand = Plus / Minus
Query: 148 ttctaccatgagttaagagaagaagttagattactccattgaccaggagactcaactgga 207
||||| ||||| | ||||||| || || ||||||||||||| || || |||||| ||||
Sbjct: 1418 ttctatcatgactgaagagaaaaaattggattactccattgttcaagaaactcaattgga 1359
Query: 208 atctggtgaattccacgaacaaaacagctatgtttcgcaatctgatgcttctccagtcga 267
| |||| || ||| | |||| ||||||||||||||||||||| ||| |||| | |||||
Sbjct: 1358 acctggcgagttcgatgaactaaacagctatgtttcgcaatccgatacttcccgagtcgg 1299
Query: 268 gggtaccaggtgggaacggttcagggactcgttcaagcgagctgatactcaggatttgga 327
||||||||| ||||||||||||| || || |||| | |||||| || ||| |||||
Sbjct: 1298 gggtaccagatgggaacggttcaaagattctttcagggaagctgaaaccgtggacttgga 1239
Query: 328 tcctaatttaacggacgccgagaaaatggccattcttacagctaatgcgcctttgaaaag 387
||| | | |||| || ||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 1238 tccaagtctaacacctgctgagaagatggccattcttacagctaatgcccctttgaaaag 1179
Query: 388 aactttgaaatcaagacatttgcagatgattgccatcggtggtgctattggtaccggtct 447
|||||||||||||||||||||||| ||||||| || |||||||| ||||||||||||||
Sbjct: 1178 aactttgaaatcaagacatttgcaaatgattggtataggtggtgccattggtaccggtct 1119
Query: 448 tttcgttggttctggtaaggcattggctactgccggtcctgcaggtatcttgatcggttg 507
||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||
Sbjct: 1118 tttcgttggttctggtaagtccttggctactgctggtcctgcaggtatcttgatcggttg 1059
Query: 508 ggctcttaccggtactatgatttactgtatggttatggccatgggtgagttagctgtcac 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1058 ggctcttaccggtactatgatttactgtatggttatggccatgggtgagttagctgttac 999
Query: 568 tttccctatcgctggtgggttcaccacttatgcatccagatttgtcgatgaatccttcgg 627
|||||| | || ||||||| || ||||||||||| ||||||||||||||||| || ||
Sbjct: 998 cttccctgttgcaggtgggtatacaacttatgcatcgagatttgtcgatgaatcttttgg 939
Query: 628 tttcgcttttaacact 643
||| || |||||||||
Sbjct: 938 ttttgcgtttaacact 923
Score = 216 bits (109), Expect = 6e-56
Identities = 148/161 (91%)
Strand = Plus / Minus
Query: 680 gaaattgttgctgcttctattacggtgaattactggggtactccagataaatatagagat 739
||||| || ||||||||||||||||||||||||||||| ||||||| ||||||||| |||
Sbjct: 886 gaaatagtggctgcttctattacggtgaattactggggcactccagctaaatatagggat 827
Query: 740 gggtttgttgcgttgttttatgtggtgattgtcgctatcaatttctttggtgttaagggt 799
| ||| || || |||||||||||||||||||||| ||||||||| |||||||| ||||||
Sbjct: 826 gcgttcgtcgccttgttttatgtggtgattgtcggtatcaatttatttggtgtcaagggt 767
Query: 800 tacggtgaagctgaatttatcttttccttcatcaaagttat 840
||||||||||||||||||||||||||||| |||||||||||
Sbjct: 766 tacggtgaagctgaatttatcttttcctttatcaaagttat 726
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6228
Number of Sequences: 1807
Number of extensions: 6228
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 2
length of query: 862
length of database: 10,358,551
effective HSP length: 16
effective length of query: 846
effective length of database: 10,329,639
effective search space: 8738874594
effective search space used: 8738874594
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)